BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B09SP1|AL426799
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1709 0.0
>3x_Contig1388
Length = 8256
Score = 1709 bits (861), Expect = 0.0
Identities = 884/890 (99%), Gaps = 2/890 (0%)
Strand = Plus / Plus
Query: 1 atcctcagtttcagttgtagaacccttttctccaacgaatagaatattgtagtgtggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 atcctcagtttcagttgtagaacccttttctccaacgaatagaatattgtagtgtggtct 1266
Query: 61 caaacgggacatcatgtagttagcgttcaacatcgcaatcactgaggaaaatggtagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 caaacgggacatcatgtagttagcgttcaacatcgcaatcactgaggaaaatggtagtcc 1326
Query: 121 cttggagcccatcatcttgatgtaggcatatgaaattggaagaattgatgcacttccgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 cttggagcccatcatcttgatgtaggcatatgaaattggaagaattgatgcacttccgta 1386
Query: 181 tggtgccgaagagacggaggcgntagatttatcagaaccgacaccggttatcatgggtac 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1387 tggtgccgaagagacggaggcgatagatttatcagaaccgacaccggttatcatgggtac 1446
Query: 241 cacgtcgtgagcaggcaagtatggagccaagtgtgattgtacacaaattgggcccatacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 cacgtcgtgagcaggcaagtatggagccaagtgtgattgtacacaaattgggcccatacc 1506
Query: 301 aggaccaccaccaccgtgtgg-atagagaatgtcttatgtaagttcaaatggcacacgtc 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 aggaccaccaccaccgtgtgggatagagaatgtcttatgtaagttcaaatggcacacgtc 1566
Query: 360 agcgttcaagtcaccaggagaggttaatcccacctgagcattcatgttggcaccatccaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 agcgttcaagtcaccaggagaggttaatcccacctgagcattcatgttggcaccatccaa 1626
Query: 420 atacacttgtccaccattttcatgaaccaagtcgatggcggttctgacaccaggctcgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 atacacttgtccaccattttcatgaaccaagtcgatggcggttctgacaccaggctcgaa 1686
Query: 480 taacccgtaagtbgatggatatgtaatcataatggcggctaaattgtctttgtgtttttc 539
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 taacccgtaagttgatggatatgtaatcataatggcggctaaattgtctttgtgtttttc 1746
Query: 540 ggctttagccttcaaatcaacgaggtccagagatccgttcttcagacagtcaactgggat 599
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1747 ggctttagccttcaaatcaacgaggtccagagatccgttcttcagacagttaactgggat 1806
Query: 600 caccttcaaaccacacatagcagcagaggcggggtttgtaccatgtgcagagacagggat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 caccttcaaaccacacatagcagcagaggcggggtttgtaccatgtgcagagacagggat 1866
Query: 660 caaacatatgttacggtgggtttctccgcggtcttcgaagtatcttctgatgactctaag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1867 caaacatatgttacggtgggtttctccgcggtcttcgaagtatcttctgatgactctaag 1926
Query: 720 accagcgtattcaccttgagctccagagtttggttgtaatgaaacttcatcgaatccggt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1927 accagcgtattcaccttgagctccagagtttggttgtaatgaaacttcatcgaatccggt 1986
Query: 780 aatagatgcaagttctttttccaagtttttgatcaaaacctcgtatccttccactttgat 839
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1987 aatagatgcaagatctttttccaagtttttgatcaaaacctcgtatccttccac-ttgat 2045
Query: 840 cccttggttggaatggatggatattggcaaactgtggccaggtgattgga 889
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 cccttggttggaatggatggatattggcaaactgtggccaggtgattgga 2095
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5354
Number of Sequences: 1807
Number of extensions: 5354
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)